- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : N559_3273
Description : putative transporter [Ensembl]. betaine/carnitine/choline family transporter, BCCT transporter family [InterProScan].
Gene families : OG_02_0000417 (OrthoFinder) Phylogenetic Tree(s): OG0000417_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AGT24931 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AGT25378 | N559_3740, BetT | choline transport protein BetT [Ensembl].... | 0.04 | OrthoFinder | |
| CPC65789 | betT, ERS093114_00981 | High-affinity choline uptake protein BetT [Ensembl].... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| MF | GO:0022857 | transmembrane transporter activity | IEA | Interproscan |
| BP | GO:0071705 | nitrogen compound transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| MF | GO:0008199 | ferric iron binding | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
| BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
| BP | GO:0009712 | catechol-containing compound metabolic process | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0018576 | catechol 1,2-dioxygenase activity | IEP | Enrichment |
| BP | GO:0018958 | phenol-containing compound metabolic process | IEP | Enrichment |
| MF | GO:0019114 | catechol dioxygenase activity | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000060 | BCCT_transptr | 13 | 499 |
| No external refs found! |