AGT25029 (N559_3376)

Aliases : N559_3376

Description : thiamine pyrophosphate enzyme, TPP binding domain protein [Ensembl]. N-terminal TPP binding domain, central domain, C-terminal TPP binding domain [InterProScan].

Gene families : OG_02_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT25029
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC73958 poxB, b0871 pyruvate dehydrogenase, thiamine triphosphate-binding,... 0.13 OrthoFinder
AAC76694 ilvB, b3671 acetolactate synthase 2 large subunit [Ensembl].... 0.02 OrthoFinder
AAL19871 STM0935, poxB pyruvate dehydrogenase/oxidase FAD and thiamine PPi... 0.12 OrthoFinder
AHY39811 CJ8421_02800 acetolactate synthase 3 catalytic subunit [Ensembl].... 0.02 OrthoFinder
CPC63412 pox5, ERS093114_00907 Pyruvate oxidase [Ensembl]. Thiamine pyrophosphate... 0.03 OrthoFinder
CRN82076 ydaP Putative thiamine pyrophosphate-containing protein YdaP... 0.03 OrthoFinder
CRO59827 alsS Acetolactate synthase [Ensembl]. Thiamine pyrophosphate... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
BP GO:0009268 response to pH IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0010447 response to acidic pH IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0071214 cellular response to abiotic stimulus IEP Enrichment
BP GO:0071467 cellular response to pH IEP Enrichment
BP GO:0071468 cellular response to acidic pH IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:0104004 cellular response to environmental stimulus IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 7 173
IPR012000 Thiamin_PyroP_enz_cen_dom 195 322
IPR011766 TPP_enzyme-bd_C 382 528
No external refs found!