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  5. AGT25040

AGT25040 (N559_3387)


Aliases : N559_3387

Description : arginine 3rd transport system periplasmic binding protein [Ensembl]. Solute-binding protein family 3/N-terminal domain of MltF [InterProScan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25040
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73947 artJ, b0860 arginine ABC transporter periplasmic binding protein... 0.15 OrthoFinder
AAC73950 artI, b0863 arginine transporter subunit [Ensembl]. Bacterial... 0.08 OrthoFinder
AAC74987 tcyJ, b1920 cystine transporter subunit [Ensembl]. Bacterial... 0.08 OrthoFinder
AAC75369 hisJ, b2309 histidine ABC transporter periplasmic binding protein... 0.07 OrthoFinder
AAC75370 argT, b2310 lysine/arginine/ornithine transporter subunit [Ensembl].... 0.03 OrthoFinder
AAK98905 spr0101, ABC-SBP ABC transporter solute-binding protein-amino acid... 0.03 OrthoFinder
AAL00055 spr1251, glnH ABC transporter substrate-binding... 0.04 OrthoFinder
AAL19766 STM0830, glnH glutamine high-affinity transporter [Ensembl]. Bacterial... 0.04 OrthoFinder
AAL19822 STM0887, artJ arginine 3rd transport system [Ensembl]. Bacterial... 0.11 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.09 OrthoFinder
AAL21255 STM2354, hisJ histidine transport protein [Ensembl]. Bacterial... 0.13 OrthoFinder
AAL21256 STM2355, argT lysine/arginine/ornithine transport protein [Ensembl].... 0.07 OrthoFinder
AGT25391 N559_3755 ABC transporter, substrate-binding protein, family 3... 0.04 OrthoFinder
AKI49732 L2625_01873 amino acid ABC transporter, amino acid-binding protein... 0.03 OrthoFinder
AKI50283 L2625_02451 polar amino acid ABC transporter, substrate-binding... 0.04 OrthoFinder
AKP15747 WX61_01712 putative amino-acid ABC transporter-binding protein... 0.04 OrthoFinder
CCL16927 BN171_1000001 ABC-type transport system, aminoacid-family... 0.05 OrthoFinder
CCL18016 BN171_2030002 ABC-type transport system, aminoacid-family... 0.04 OrthoFinder
CCL18562 BN171_2440003 ABC-type transport system,cystine/aminoacid-family... 0.04 OrthoFinder
CCL18566 BN171_2440007 ABC-type transport system,cystine/aminoacid-family... 0.05 OrthoFinder
CPD19875 ERS093114_02271 Cysteine ABC transporter%2C substrate-binding protein... 0.02 OrthoFinder
CRN71135 argT_1 Lysine-arginine-ornithine-binding periplasmic protein... 0.05 OrthoFinder
CRP46906 fliY_2 Sulfate starvation-induced protein 7 [Ensembl].... 0.04 OrthoFinder
CRP49296 artJ ABC transporter arginine-binding protein 1 precursor... 0.04 OrthoFinder
EDJ90649 CGSHi22421_04048 arginine transporter permease subunit ArtQ [Ensembl].... 0.05 OrthoFinder
KNA53745 VCV51_033271 bacterial extracellular solute-binding protein, family 3... 0.05 OrthoFinder
KNA58916 VCV51_031259 lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder
KNA59810 VCV51_030870 lysine-arginine-ornithine-binding periplasmic protein... 0.08 OrthoFinder
KNA59873 VCV51_032284 bacterial extracellular solute-binding protein, family 3... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008924 malate dehydrogenase (quinone) activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046417 chorismate metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 23 242
No external refs found!