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  5. AGT25243

AGT25243 (N559_3596)


Aliases : N559_3596

Description : succinate dehydrogenase cytochrome b556 small membrane subunit [Ensembl].


Gene families : OG_02_0001895 (OrthoFinder) Phylogenetic Tree(s): OG0001895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25243
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC73816 sdhD, b0722 succinate dehydrogenase, membrane subunit, binds... 0.19 OrthoFinder
AAL19677 STM0733, sdhD succinate dehydrogenase, hydrophobic subunit [Ensembl].... 0.21 OrthoFinder
AKP16039 sdhD, WX61_02012 Succinate dehydrogenase hydrophobic membrane anchor... 0.03 OrthoFinder
CRP29541 sdhD Succinate dehydrogenase hydrophobic membrane anchor... 0.06 OrthoFinder
KNA59598 VCV51_032522 succinate dehydrogenase [Ensembl]. Succinate... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0003994 aconitate hydratase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015501 glutamate:sodium symporter activity IEP Enrichment
BP GO:0015800 acidic amino acid transport IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
BP GO:0015813 L-glutamate transmembrane transport IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000701 SuccDH_FuR_B_TM-su 11 104
No external refs found!