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  5. AGT25385

AGT25385 (N559_3747)


Aliases : N559_3747

Description : putative ABC transport system permease protein [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25385
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.06 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.08 OrthoFinder
AAL00508 spr1705, amiD ABC transporter membrane-spanning permease-oligopeptide... 0.04 OrthoFinder
AAL19787 STM0851, yliD putative ABC transporter inner membrane component... 0.03 OrthoFinder
AAL20183 STM1257 putative ABC transporter [Ensembl].... 0.05 OrthoFinder
AAL20662 STM1744, oppC oligopeptide transport protein [Ensembl]. N-terminal TM... 0.04 OrthoFinder
AAL22489 STM3628, dppC dipeptide transport protein 2 [Ensembl]. N-terminal TM... 0.12 OrthoFinder
AEA95054 opp2C, OG1RF_12367 ABC superfamily ATP binding cassette transporter, ABC... 0.06 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.06 OrthoFinder
AGT22121 N559_0302, NikC nickel transporter permease NikC [Ensembl].... 0.05 OrthoFinder
AGT23465 N559_1723 ABC transporter permease [Ensembl]. N-terminal TM domain... 0.04 OrthoFinder
AGT24127 N559_2434 putative ABC transport system permease protein... 0.08 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.05 OrthoFinder
AKI50192 oppC, L2625_02358 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
CCG26342 OppC Oligopeptide transport system permease protein OppC (TC... 0.04 OrthoFinder
CCL17023 oppC, BN171_1090004 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CPC32230 gsiD_1, ERS093114_00036 nickel transport system permease protein [Ensembl].... 0.05 OrthoFinder
CPC95740 gsiD_2, ERS093114_01724 Oligopeptide transport system permease protein... 0.04 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.03 OrthoFinder
EDJ91925 oppD, CGSHi22421_09218 oligopeptide transporter ATP-binding component... 0.05 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.04 OrthoFinder
KNA58585 VCV51_031122 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 94 274
IPR025966 OppC_N 6 53
No external refs found!