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AGT25474 (N559_3838)


Aliases : N559_3838

Description : putative ABC transporter [Ensembl].


Gene families : OG_02_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25474
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAC74586 lsrA, b1513 autoinducer 2 import ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AAC76772 rbsA, b3749 D-ribose ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAC77048 alsA, b4087 D-allose ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAL22740 STM3882, rbsA D-ribose high-affinity transport protein [Ensembl]. ABC... 0.04 OrthoFinder
AGT26698 N559_5124 D-ribose transporter ATP binding protein [Ensembl]. 0.05 OrthoFinder
CRN86529 araG Arabinose import ATP-binding protein AraG [Ensembl]. ABC... 0.05 OrthoFinder
KNA60663 VCV51_032102 ribose ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 270 424
IPR003439 ABC_transporter-like_ATP-bd 21 170
No external refs found!