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  5. AGT25729

AGT25729 (N559_4103)


Aliases : N559_4103

Description : S-methylmethionine transporter [Ensembl]. Amino acid permease/ SLC12A domain [InterProScan].


Gene families : OG_02_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25729
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73223 aroP, b0112 aromatic amino acid transporter [Ensembl]. Amino acid... 0.15 OrthoFinder
AAC73363 mmuP, b0260 CP4-6 prophage; putative S-methylmethionine transporter... 0.16 OrthoFinder
AAC75217 lysP, b2156 lysine transporter [Ensembl]. Amino acid permease [Interproscan]. 0.15 OrthoFinder
AAC77165 cycA, b4208 D-alanine/D-serine/glycine transporter [Ensembl]. Amino... 0.08 OrthoFinder
AAL19114 STM0150, aroP APC family aromatic amino acid transporter [Ensembl].... 0.27 OrthoFinder
AAL21104 STM2200, lysP APC family lysine-specific permease [Ensembl]. Amino... 0.06 OrthoFinder
AAL23218 STM4398, cycA APC family D-alanine/D-serine/glycine transport protein... 0.03 OrthoFinder
AEA93569 OG1RF_10882 APC family amino acid-polyamine-organocation transporter... 0.03 OrthoFinder
AGT24504 N559_2833 D-alanine/D-serine/glycine transport protein [Ensembl].... 0.07 OrthoFinder
AGT24557 N559_2888 aromatic amino acid transport protein [Ensembl]. Amino... 0.04 OrthoFinder
AGT25792 N559_4167 gamma-aminobutyrate transporter [Ensembl]. Amino acid... 0.04 OrthoFinder
CCG27180 No alias Histidine transport protein (permease) [Ensembl]. Amino... 0.03 OrthoFinder
CCP44469 cycA, Rv1704c Probable D-serine/alanine/glycine transporter protein... 0.02 OrthoFinder
CPC33330 lysP_1, ERS093114_00083 gamma-aminobutyrate permease [Ensembl]. Amino acid... 0.04 OrthoFinder
CPC86559 aapA, ERS093114_01519 D-serine/D-alanine/glycine transporter [Ensembl]. Amino... 0.03 OrthoFinder
CPD19103 cycA, ERS093114_02244 D-serine/D-alanine/glycine transporter [Ensembl]. Amino... 0.03 OrthoFinder
CRO55488 rocC Amino-acid permease RocC [Ensembl]. Amino acid permease... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR004841 AA-permease/SLC12A_dom 20 460
No external refs found!