AGT25977 (N559_4367, AraC)


Aliases : N559_4367, AraC

Description : DNA-binding transcriptional regulator AraC [Ensembl]. AraC-like ligand binding domain, Helix-turn-helix domain, AraC-type arabinose-binding/dimerisation domain, DNA binding HTH domain [InterProScan].


Gene families : OG_02_0003395 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25977
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAL19068 STM0104, araC transcriptional regulator (AraC/XylS family) for ara... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003313 AraC-bd 28 160
IPR018060 HTH_AraC 200 278
No external refs found!