AGT26100 (N559_4495)

Aliases : N559_4495

Description : transcriptional regulator [Ensembl]. Helix-turn-helix domain, SIS domain, rpiR family [InterProScan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT26100
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAL20058 STM1127 putative transcriptional regulator [Ensembl]. SIS... 0.04 OrthoFinder
AAL21466 STM2572, yfhH putative ABC superfamily transport protein [Ensembl].... 0.03 OrthoFinder
AEA95093 OG1RF_12406 RpiR family phosphosugar-binding transcriptional... 0.03 OrthoFinder
AKI48471 L2625_00533 SIS domain protein [Ensembl]. Sugar isomerase (SIS),... 0.03 OrthoFinder
AKI50732 L2625_02948 phosphosugar-binding transcriptional regulator, RpiR... 0.03 OrthoFinder
CCL18633 BN171_2480008 Transcriptional regulator, RpiR family [Ensembl].... 0.03 OrthoFinder
CCL19479 BN171_3180003 Transcriptional regulator, RpiR family [Ensembl].... 0.03 OrthoFinder
CCL19496 BN171_3180020 Transcriptional regulator, RpiR family [Ensembl].... 0.03 OrthoFinder
CCL20135 BN171_370009 Transcriptional regulator, RpiR family [Ensembl].... 0.02 OrthoFinder
CCL20136 BN171_370010 Transcriptional regulator, RpiR family [Ensembl].... 0.03 OrthoFinder
CPC91357 rpiR, ERS093114_01611 Sialic acid utilization regulator%2C RpiR family... 0.01 OrthoFinder
CRP05388 ybbH_1 putative HTH-type transcriptional regulator YbbH... 0.04 OrthoFinder
CRP64567 ybbH_2 putative HTH-type transcriptional regulator YbbH... 0.03 OrthoFinder
EDJ90289 CGSHi22421_09517 N-acetylmannosamine kinase [Ensembl]. SIS domain,... 0.03 OrthoFinder
KNA58972 VCV51_031233 transcriptional regulator [Ensembl]. SIS domain,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0097367 carbohydrate derivative binding IEA Interproscan
BP GO:1901135 carbohydrate derivative metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
MF GO:0008811 chloramphenicol O-acetyltransferase activity IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR000281 HTH_RpiR 10 79
IPR001347 SIS_dom 124 252
No external refs found!