AGT26100 (N559_4495)

Aliases : N559_4495

Description : transcriptional regulator [Ensembl]. Helix-turn-helix domain, SIS domain, rpiR family [InterProScan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT26100
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AAL20058	STM1127	putative transcriptional regulator [Ensembl]. SIS...	0.04	OrthoFinder
AAL21466	STM2572, yfhH	putative ABC superfamily transport protein [Ensembl]....	0.03	OrthoFinder
AEA95093	OG1RF_12406	RpiR family phosphosugar-binding transcriptional...	0.03	OrthoFinder
AKI48471	L2625_00533	SIS domain protein [Ensembl]. Sugar isomerase (SIS),...	0.03	OrthoFinder
AKI50732	L2625_02948	phosphosugar-binding transcriptional regulator, RpiR...	0.03	OrthoFinder
CCL18633	BN171_2480008	Transcriptional regulator, RpiR family [Ensembl]....	0.03	OrthoFinder
CCL19479	BN171_3180003	Transcriptional regulator, RpiR family [Ensembl]....	0.03	OrthoFinder
CCL19496	BN171_3180020	Transcriptional regulator, RpiR family [Ensembl]....	0.03	OrthoFinder
CCL20135	BN171_370009	Transcriptional regulator, RpiR family [Ensembl]....	0.02	OrthoFinder
CCL20136	BN171_370010	Transcriptional regulator, RpiR family [Ensembl]....	0.03	OrthoFinder
CPC91357	rpiR, ERS093114_01611	Sialic acid utilization regulator%2C RpiR family...	0.01	OrthoFinder
CRP05388	ybbH_1	putative HTH-type transcriptional regulator YbbH...	0.04	OrthoFinder
CRP64567	ybbH_2	putative HTH-type transcriptional regulator YbbH...	0.03	OrthoFinder
EDJ90289	CGSHi22421_09517	N-acetylmannosamine kinase [Ensembl]. SIS domain,...	0.03	OrthoFinder
KNA58972	VCV51_031233	transcriptional regulator [Ensembl]. SIS domain,...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	IEA	Interproscan
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	IEA	Interproscan
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Enrichment
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Enrichment
MF	GO:0004427	inorganic diphosphatase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004673	protein histidine kinase activity	IEP	Enrichment
BP	GO:0006551	leucine metabolic process	IEP	Enrichment
MF	GO:0008811	chloramphenicol O-acetyltransferase activity	IEP	Enrichment
MF	GO:0008855	exodeoxyribonuclease VII activity	IEP	Enrichment
BP	GO:0009098	leucine biosynthetic process	IEP	Enrichment
MF	GO:0015075	ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
BP	GO:0046688	response to copper ion	IEP	Enrichment
MF	GO:0140299	small molecule sensor activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000281	HTH_RpiR	10	79
IPR001347	SIS_dom	124	252

External Links

No external refs found!

AGT26100 (N559_4495)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation