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  5. AGT26299

AGT26299 (N559_4707)


Aliases : N559_4707

Description : PTS system L-ascorbate-specific transporter subunit IIB [Ensembl].


Gene families : OG_02_0000270 (OrthoFinder) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26299
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC77151 ulaB, b4194 L-ascorbate-specific enzyme IIB component of PTS... 0.24 OrthoFinder
AAL00651 spr1848, PTS-EII Phosphotransferase system sugar-specific EII component... 0.04 OrthoFinder
AAL00741 spr1939 Hypothetical protein [Ensembl]. PTS system [Interproscan]. 0.05 OrthoFinder
AAL23204 STM4384, sgaB putative PTS enzyme IIsga subunit [Ensembl]. PTS system... 0.08 OrthoFinder
AEA93593 sgaB, OG1RF_10906 PTS family porter component IIB [Ensembl]. PTS system... 0.06 OrthoFinder
AGT25687 N559_4059 putative phosphotransferase system,... 0.03 OrthoFinder
CCG26475 No alias Ascorbate-specific PTS system, EIIB component [Ensembl].... 0.07 OrthoFinder
CCG27334 No alias PTS system IIB component [Ensembl]. PTS system [Interproscan]. 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003501 PTS_EIIB_2/3 1 63
No external refs found!