Aliases : N559_4707
Description : PTS system L-ascorbate-specific transporter subunit IIB [Ensembl].
Gene families : OG_02_0000270 (OrthoFinder) Phylogenetic Tree(s): OG0000270_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AGT26299 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC77151 | ulaB, b4194 | L-ascorbate-specific enzyme IIB component of PTS... | 0.24 | OrthoFinder | |
AAL00651 | spr1848, PTS-EII | Phosphotransferase system sugar-specific EII component... | 0.04 | OrthoFinder | |
AAL00741 | spr1939 | Hypothetical protein [Ensembl]. PTS system [Interproscan]. | 0.05 | OrthoFinder | |
AAL23204 | STM4384, sgaB | putative PTS enzyme IIsga subunit [Ensembl]. PTS system... | 0.08 | OrthoFinder | |
AEA93593 | sgaB, OG1RF_10906 | PTS family porter component IIB [Ensembl]. PTS system... | 0.06 | OrthoFinder | |
AGT25687 | N559_4059 | putative phosphotransferase system,... | 0.03 | OrthoFinder | |
CCG26475 | No alias | Ascorbate-specific PTS system, EIIB component [Ensembl].... | 0.07 | OrthoFinder | |
CCG27334 | No alias | PTS system IIB component [Ensembl]. PTS system [Interproscan]. | 0.09 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEA | Interproscan |
BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | Enrichment |
BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0009112 | nucleobase metabolic process | IEP | Enrichment |
BP | GO:0015711 | organic anion transport | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003501 | PTS_EIIB_2/3 | 1 | 63 |
No external refs found! |