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  5. AGT26513

AGT26513 (N559_4929)


Aliases : N559_4929

Description : PTS system lactose/cellobiose specific IIB subunit [Ensembl].


Gene families : OG_02_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26513
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAK99082 spr0278, PTS-EII Phosphotransferase system sugar-specific EII component... 0.04 OrthoFinder
AAL00638 spr1835, ptcB Phosphotransferase system system, cellobiose-specific... 0.04 OrthoFinder
AAL20237 STM1312, celA PTS family sugar specific enzyme IIB for cellobiose,... 0.08 OrthoFinder
AEA93432 celA2, OG1RF_10745 PTS family porter, enzyme I [Ensembl]. PTS system [Interproscan]. 0.05 OrthoFinder
AEA93437 celA3, OG1RF_10750 PTS family porter, enzyme I [Ensembl]. PTS system [Interproscan]. 0.05 OrthoFinder
AGT21915 N559_0089 putative phosphotransferase system,... 0.03 OrthoFinder
AGT22930 N559_1161 PTS system lactose/cellobiose specific IIB subunit [Ensembl]. 0.02 OrthoFinder
AGT24163 N559_2473 lactose/cellobiose-specific PTS family enzyme IIB... 0.03 OrthoFinder
AKI48270 L2625_00323 PTS system, IIB component [Ensembl]. Phosphotransferase... 0.03 OrthoFinder
AKI48823 L2625_00897 PTS system, beta-glucoside-specific, IIB component... 0.03 OrthoFinder
AKI48862 L2625_00940 PTS system, cellobiose-specific, IIB component... 0.03 OrthoFinder
AKI49714 L2625_01855 PTS system, beta-glucoside-specific, IIB component... 0.05 OrthoFinder
AKI50618 L2625_02828 PTS system, beta-glucoside-specific, IIB component... 0.04 OrthoFinder
AKI50700 L2625_02916 PTS system, cellobiose-specific, IIB component... 0.04 OrthoFinder
AKI50719 L2625_02935 PTS system, beta-glucoside-specific, IIB component... 0.03 OrthoFinder
CCG26297 No alias PTS system, cellobiose-specific IIB component [Ensembl].... 0.05 OrthoFinder
CCG26678 No alias PTS system, cellobiose-specific IIB component [Ensembl].... 0.03 OrthoFinder
CCL19379 celA, BN171_3080026 PTS system, cellobiose-specific IIB component [Ensembl].... 0.03 OrthoFinder
CCL19894 BN171_3590015 PTS system, lactose/cellobiose-family IIB component... 0.04 OrthoFinder
KNA56014 VCV51_030929 PTS system, cellobiose-specific IIB component [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
MF GO:0015926 glucosidase activity IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032954 regulation of cytokinetic process IEP Enrichment
BP GO:0032955 regulation of division septum assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901891 regulation of cell septum assembly IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003501 PTS_EIIB_2/3 3 95
No external refs found!