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  5. AGT26519

AGT26519 (N559_4935)


Aliases : N559_4935

Description : ribosomal protein L10 [Ensembl].


Gene families : OG_02_0000683 (OrthoFinder) Phylogenetic Tree(s): OG0000683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26519
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC76959 rplJ, b3985 50S ribosomal subunit protein L10 [Ensembl]. Ribosomal... 0.26 OrthoFinder
AAL00016 spr1212, rplJ 50S Ribosomal protein L10 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
AAL22979 STM4151, rplJ 50S ribosomal subunit protein L10 [Ensembl]. Ribosomal... 0.32 OrthoFinder
ADK86694 rplJ, MPNE_0636 ribosomal protein L10 [Ensembl]. Ribosomal protein L10... 0.14 OrthoFinder
AEA94768 rplJ, OG1RF_12081 50S ribosomal protein L10 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
AKI48217 rplJ, L2625_00268 ribosomal protein L10 [Ensembl]. Ribosomal protein L10P... 0.12 OrthoFinder
CBI65848 rplJ, HPB8_291 large subunit ribosomal protein L10 [Ensembl]. Ribosomal... 0.16 OrthoFinder
CCG27669 No alias LSU ribosomal protein L10p (P0) [Ensembl]. Ribosomal... 0.14 OrthoFinder
CCL20641 rplJ, BN171_80006 50S ribosomal protein L10 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
CCP43394 rplJ, Rv0651 50S ribosomal protein L10 RplJ [Ensembl]. Ribosomal... 0.08 OrthoFinder
CPC57358 rplJ, ERS093114_00839 50S ribosomalprotein L10p (P0) [Ensembl]. Ribosomal... 0.23 OrthoFinder
EDJ90228 rplJ, CGSHi22421_05052 50S ribosomal protein L10 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
KNA49130 VCV51_033810 ribosomal protein L10 [Ensembl]. Ribosomal protein L10... 0.17 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 5 101
No external refs found!