AGT26636 (N559_5059, CpxR)

Aliases : N559_5059, CpxR

Description : DNA-binding transcriptional regulator CpxR [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT26636
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.02 OrthoFinder
AAC76430 ompR, b3405 response regulator in two-component regulatory system... 0.04 OrthoFinder
AAC76894 cpxR, b3912 response regulator in two-component regulatory system... 0.06 OrthoFinder
AAK99140 spr0336, csrR Response regulator [Ensembl]. Transcriptional regulatory... 0.03 OrthoFinder
AAK99382 spr0578, rr09 Response regulator [Ensembl]. Helix-turn-helix domain,... 0.04 OrthoFinder
AAL20028 STM1096, copR Copper resistance transcriptional regulatory protein... 0.04 OrthoFinder
AAL22364 STM3502, ompR response regulator in two-component regulatory system... 0.03 OrthoFinder
AAL22899 STM4059, cpxR response reguator in two-component regulatory system... 0.06 OrthoFinder
AAL23116 STM4292, basR response regulator in two-component regulatory system... 0.05 OrthoFinder
AGT25177 N559_3529, BasR DNA-binding transcriptional regulator BasR [Ensembl].... 0.03 OrthoFinder
AHY40431 CJ8421_06120 DNA-binding response regulator [Ensembl].... 0.02 OrthoFinder
AKP15489 ompR, WX61_01443 Transcriptional regulatory protein OmpR [Ensembl].... 0.02 OrthoFinder
CCG26613 CiaR Two component system response regulator CiaR [Ensembl].... 0.03 OrthoFinder
CCL20068 BN171_3690012 Two-component response regulator, CheY family [Ensembl].... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.02 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.02 OrthoFinder
CPC86428 phoP, ERS093114_01516 Alkaline phosphatase synthesis transcriptional... 0.03 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.02 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.04 OrthoFinder
EDJ90310 CGSHi22421_02241 transcriptional regulatory protein [Ensembl].... 0.03 OrthoFinder
KNA55649 VCV51_033016 response regulator receiver domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 4 112
IPR001867 OmpR/PhoB-type_DNA-bd 152 228
No external refs found!