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AGT26644 (N559_5067)


Aliases : N559_5067

Description : L-rhamnose isomerase [Ensembl].


Gene families : OG_02_0001834 (OrthoFinder) Phylogenetic Tree(s): OG0001834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26644
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAL22886 STM4046, rhaA L-rhamnose isomerase [Ensembl]. L-rhamnose isomerase... 0.07 OrthoFinder
AAT48234 rhaA, b3903 L-rhamnose isomerase [Ensembl]. L-rhamnose isomerase... 0.06 OrthoFinder
AEA93007 rhaA, OG1RF_10320 L-rhamnose isomerase [Ensembl]. L-rhamnose isomerase... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008740 L-rhamnose isomerase activity IEA Interproscan
BP GO:0019299 rhamnose metabolic process IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR009308 Rhamnose_isomerase 3 418
No external refs found!