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  5. AGT26861

AGT26861 (N559_5287, PcoS)


Aliases : N559_5287, PcoS

Description : copper resistant sensor kinase PcoS [Ensembl]. His Kinase A (phospho-acceptor) domain, HAMP domain, dimerisation/phosphoacceptor domain [InterProScan].


Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26861
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AAC74681 rstB, b1609 sensory histidine kinase of RstAB two-component system... 0.04 OrthoFinder
AAC76062 qseC, b3026 quorum sensing sensory histidine kinase in two-component... 0.04 OrthoFinder
AAC77073 basS, b4112 sensory histidine kinase in two-component regulatory... 0.03 OrthoFinder
AGT25041 N559_3388 putative signal transduction histidine kinase [Ensembl].... 0.05 OrthoFinder
CPC31457 arlS, ERS093114_00003 Two component system histidine kinase ArlS [Ensembl].... 0.07 OrthoFinder
CPC70255 walK, ERS093114_01105 two-component sensor histidine kinase [Ensembl]. PAS... 0.03 OrthoFinder
CRN77883 cusS_2 Sensor kinase CusS [Ensembl]. HAMP domain, Histidine... 0.04 OrthoFinder
CRN98652 pfeS_2 Sensor protein PfeS [Ensembl]. HAMP domain, Histidine... 0.05 OrthoFinder
CRO38250 rstB_1 Sensor protein RstB [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
CRO52522 czcS_1 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.04 OrthoFinder
CRP19010 pfeS_3 Sensor protein PfeS [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
CRP43508 qseC_2 Sensor protein QseC [Ensembl]. Histidine kinase-, His... 0.03 OrthoFinder
CRP58291 czcS_3 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.04 OrthoFinder
KNA55121 VCV51_031822 hsp90-like protein [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
KNA61031 VCV51_032006 hsp90-like protein [Ensembl]. Histidine kinase-, His... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0015105 arsenite transmembrane transporter activity IEP Enrichment
BP GO:0015700 arsenite transport IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046685 response to arsenic-containing substance IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 230 295
IPR003660 HAMP_dom 173 224
IPR003594 HATPase_C 338 444
No external refs found!