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  5. AGT26973

AGT26973 (N559_5399)


Aliases : N559_5399

Description : Ccl [Ensembl]. Colicin-like bacteriocin tRNase domain, Coiled-coil receptor-binding R-domain of colicin E2, Pyosin/cloacin translocation domain, Colicin E3-like ribonuclease domain [InterProScan].


Gene families : OG_02_0010701 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26973
Cluster HCCA: Cluster_13


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009405 obsolete pathogenesis IEA Interproscan
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
MF GO:0043022 ribosome binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008924 malate dehydrogenase (quinone) activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
MF GO:0015174 basic amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015189 L-lysine transmembrane transporter activity IEP Enrichment
MF GO:0015643 toxic substance binding IEP Enrichment
MF GO:0015661 L-lysine efflux transmembrane transporter activity IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
MF GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IEP Enrichment
MF GO:0019203 carbohydrate phosphatase activity IEP Enrichment
BP GO:0030153 bacteriocin immunity IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
MF GO:0034639 L-amino acid efflux transmembrane transporter activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050308 sugar-phosphatase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1902022 L-lysine transport IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
BP GO:1903401 L-lysine transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR016128 Pyosin/cloacin_T_dom 45 319
IPR009105 Colicin_E3_ribonuclease 475 559
IPR024566 Colicin_R_dom 322 457
No external refs found!