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  5. AKI48022

AKI48022 (rpsR, L2625_00047)


Aliases : rpsR, L2625_00047

Description : ribosomal protein S18 [Ensembl]. Ribosomal protein S18 [Interproscan].


Gene families : OG_02_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI48022
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC77159 rpsR, b4202 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.29 OrthoFinder
AAL00198 spr1394, rpsR 30S Ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AAL23213 STM4393, rpsR 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.26 OrthoFinder
ADK87142 rpsR, MPNE_0262 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.11 OrthoFinder
AEA92696 rpsR, OG1RF_10009 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AGT26291 N559_4699 30S ribosomal protein S18 [Ensembl]. 0.11 OrthoFinder
AHY40278 rpsR, CJ8421_05330 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AKP14205 rpsR, WX61_00116 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CBI65793 rpsR, HPB8_236 small subunit ribosomal protein S18 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG26822 No alias SSU ribosomal protein S18p @ SSU ribosomal protein S18p,... 0.09 OrthoFinder
CCP42777 rpsR1, Rv0055 30S ribosomal protein S18-1 RpsR1 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CPC89687 rpsR, ERS093114_01560 30S ribosomalprotein S18p [Ensembl]. Ribosomal protein... 0.34 OrthoFinder
CRO53994 rpsR 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
EDJ91446 rpsR, CGSHi22421_06742 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
KNA49061 VCV51_033836 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0015234 thiamine transmembrane transporter activity IEP Enrichment
BP GO:0015888 thiamine transport IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043934 sporulation IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0051180 vitamin transport IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901474 azole transmembrane transporter activity IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 22 72
No external refs found!