AKI48081 (L2625_00107)


Aliases : L2625_00107

Description : transcriptional regulator, AraC family [Ensembl]. AraC-type arabinose-binding/dimerisation domain, DNA binding HTH domain [Interproscan].


Gene families : OG_02_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI48081
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC77349 rob, b4396 right oriC-binding transcriptional activator, AraC... 0.03 OrthoFinder
AEA94765 OG1RF_12078 AraC family transcriptional regulator [Ensembl].... 0.06 OrthoFinder
AGT24098 N559_2401 positive regulator for rhaBAD operon [Ensembl].... 0.04 OrthoFinder
AGT25404 N559_3768 putative regulatory protein [Ensembl]. Helix-turn-helix... 0.03 OrthoFinder
AGT26642 N559_5065, RhaS transcriptional activator RhaS [Ensembl]. AraC-like... 0.02 OrthoFinder
CCL19667 BN171_3370001 Transcriptional regulator, AraC family [Ensembl].... 0.04 OrthoFinder
CPC51974 melR_1, ERS093114_00686 AraC family transcriptional regulator [Ensembl].... 0.03 OrthoFinder
CPC99917 btr, ERS093114_01825 AraC family transcriptional regulator [Ensembl].... 0.03 OrthoFinder
CRO70395 pchR_1 Regulatory protein PchR [Ensembl]. Helix-turn-helix... 0.02 OrthoFinder
CRP15640 cdhR_8 Carnitine catabolism transcriptional activator... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016783 sulfurtransferase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
CC GO:0019008 molybdopterin synthase complex IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0034618 arginine binding IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003313 AraC-bd 10 146
IPR018060 HTH_AraC 198 271
No external refs found!