AKI49716 (L2625_01857)

Aliases : L2625_01857

Description : ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box helicase domain, Helicase [Interproscan].

Gene families : OG_02_0000033 (OrthoFinder) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI49716
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AAC73884	rhlE, b0797	ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box...	0.03	OrthoFinder
AAC75629	srmB, b2576	ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box...	0.04	OrthoFinder
AAC76196	deaD, b3162	ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box...	0.04	OrthoFinder
AAC76785	rhlB, b3780	ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box...	0.03	OrthoFinder
AAL19757	STM0820, rhlE	putative ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH...	0.06	OrthoFinder
AAL21537	STM2643, srmB	ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box...	0.05	OrthoFinder
AEA93263	srmB, OG1RF_10576	ATP-dependent RNA helicase DeaD [Ensembl]. DEAD/DEAH box...	0.05	OrthoFinder
AEA93852	OG1RF_11165	DEAD/DEAH box family ATP-dependent RNA helicase...	0.06	OrthoFinder
AGT22394	N559_0597, DeaD	ATP-dependent RNA helicase DeaD [Ensembl]. DbpA RNA...	0.04	OrthoFinder
AGT26585	N559_5004, RhlB	ATP-dependent RNA helicase RhlB [Ensembl]. Helicase...	0.04	OrthoFinder
AKP15465	rhlE_2, WX61_01419	ATP-dependent RNA helicase RhlE [Ensembl]. DEAD/DEAH box...	0.03	OrthoFinder
CBI66873	deaD, HPB8_1316	putative helicase [Ensembl]. DEAD/DEAH box helicase,...	0.04	OrthoFinder
CCG27251	No alias	Cold-shock DEAD-box protein A [Ensembl]. DEAD/DEAH box...	0.06	OrthoFinder
CCL16938	BN171_1020005	Putative ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH...	0.05	OrthoFinder
CCL18463	BN171_2360005	Putative ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH...	0.04	OrthoFinder
CPC81511	cshB, ERS093114_01388	ATP-dependent RNA helicase YqfR [Ensembl]. DEAD/DEAH box...	0.05	OrthoFinder
CPD23408	ERS093114_02346	ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box...	0.03	OrthoFinder
CRO01721	rhlB	ATP-dependent RNA helicase RhlB [Ensembl]. DEAD/DEAH box...	0.04	OrthoFinder
CRP22862	deaD	Cold-shock DEAD box protein A [Ensembl]. DEAD/DEAH box...	0.03	OrthoFinder
KNA55724	VCV51_031028	DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Enrichment
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Enrichment
BP	GO:0006282	regulation of DNA repair	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
MF	GO:0015234	thiamine transmembrane transporter activity	IEP	Enrichment
BP	GO:0015888	thiamine transport	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Enrichment
MF	GO:0047952	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity	IEP	Enrichment
BP	GO:0048583	regulation of response to stimulus	IEP	Enrichment
BP	GO:0051052	regulation of DNA metabolic process	IEP	Enrichment
BP	GO:0052646	alditol phosphate metabolic process	IEP	Enrichment
BP	GO:0080134	regulation of response to stress	IEP	Enrichment
BP	GO:0080135	regulation of cellular response to stress	IEP	Enrichment
MF	GO:1901474	azole transmembrane transporter activity	IEP	Enrichment
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	23	181
IPR001650	Helicase_C	233	330

External Links

No external refs found!

AKI49716 (L2625_01857)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation