AKI49830 (carB, L2625_01977)

Aliases : carB, L2625_01977

Description : carbamoyl-phosphate synthase, large subunit [Ensembl]. Carbamoyl-phosphate synthetase large subunit-like, Methylglyoxal synthase-like domain [Interproscan].

Gene families : OG_02_0000521 (OrthoFinder) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI49830
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AAC73144	carB, b0033	carbamoyl-phosphate synthase large subunit [Ensembl]....	0.04	OrthoFinder
AAK99956	spr1153, carB	Carbamoylphosphate synthase (ammonia), heavy subunit...	0.17	OrthoFinder
AEA94114	carB, OG1RF_11427	carbamoyl-phosphate synthase, large subunit [Ensembl]....	0.16	OrthoFinder
AGT25999	N559_4389	carbamoyl phosphate synthase large subunit [Ensembl]....	0.05	OrthoFinder
CCG26593	No alias	Carbamoyl-phosphate synthase large chain [Ensembl]....	0.13	OrthoFinder
CCP44143	carB, Rv1384	Probable carbamoyl-phosphate synthase large chain CarB...	0.04	OrthoFinder
CPC37042	pyrAB, ERS093114_00221	Carbamoyl-phosphate synthase large chain [Ensembl]....	0.29	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	Enrichment
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Enrichment
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Enrichment
BP	GO:0009112	nucleobase metabolic process	IEP	Enrichment
BP	GO:0009116	nucleoside metabolic process	IEP	Enrichment
MF	GO:0016597	amino acid binding	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Enrichment
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
BP	GO:0046112	nucleobase biosynthetic process	IEP	Enrichment
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Enrichment
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Enrichment
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:1901657	glycosyl compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	667	865
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	128	333
IPR005480	CarbamoylP_synth_lsu_oligo	426	540
IPR011607	MGS-like_dom	950	1036

External Links

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AKI49830 (carB, L2625_01977)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation