AKI50364 (licT, L2625_02552)

Aliases : licT, L2625_02552

Description : transcriptional antiterminator [Ensembl]. CAT RNA-binding domain, PRD domain [Interproscan].

Gene families : OG_02_0000403 (OrthoFinder) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKI50364
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAK99308 spr0504, licT Transcriptional antiterminator (BglG family) [Ensembl].... 0.02 OrthoFinder
AGT23421 N559_1677 cryptic beta-glucoside bgl operon antiterminator... 0.04 OrthoFinder
CCG26226 No alias Beta-glucoside bgl operon antiterminator, BglG family... 0.06 OrthoFinder
CCL18933 BN171_2720033 Transcription antiterminator, PTS operon regulator... 0.05 OrthoFinder
CCL19012 bglG, BN171_280027 Transcription antiterminator, PTS operon regulator... 0.09 OrthoFinder
CCL19562 bglG, BN171_3260013 Transcription antiterminator, PTS operon regulator... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR004341 CAT_RNA-bd_dom 1 55
IPR011608 PRD 76 163
IPR011608 PRD 181 273
No external refs found!