AKI50364 (licT, L2625_02552)

Aliases : licT, L2625_02552

Description : transcriptional antiterminator [Ensembl]. CAT RNA-binding domain, PRD domain [Interproscan].

Gene families : OG_02_0000403 (OrthoFinder) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI50364
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAK99308	spr0504, licT	Transcriptional antiterminator (BglG family) [Ensembl]....	0.02	OrthoFinder
AGT23421	N559_1677	cryptic beta-glucoside bgl operon antiterminator...	0.04	OrthoFinder
CCG26226	No alias	Beta-glucoside bgl operon antiterminator, BglG family...	0.06	OrthoFinder
CCL18933	BN171_2720033	Transcription antiterminator, PTS operon regulator...	0.05	OrthoFinder
CCL19012	bglG, BN171_280027	Transcription antiterminator, PTS operon regulator...	0.09	OrthoFinder
CCL19562	bglG, BN171_3260013	Transcription antiterminator, PTS operon regulator...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
MF	GO:0008982	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004341	CAT_RNA-bd_dom	1	55
IPR011608	PRD	76	163
IPR011608	PRD	181	273

External Links

No external refs found!