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AKI50392 (L2625_02581)


Aliases : L2625_02581

Description : transcriptional regulator, TetR family [Ensembl]. DNA-binding HTH domain [Interproscan].


Gene families : OG_02_0000023 (OrthoFinder) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI50392
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC74690 uidR, b1618 transcriptional repressor [Ensembl]. Bacterial... 0.03 OrthoFinder
AKI48800 L2625_00873 transcriptional regulator, TetR family [Ensembl].... 0.05 OrthoFinder
CCL17888 BN171_1920015 Transcriptional regulator, TetR family [Ensembl].... 0.03 OrthoFinder
CCL19076 BN171_2870006 Transcriptional regulator, TetR family [Ensembl].... 0.04 OrthoFinder
CCL20133 BN171_370007 Transcriptional regulator, TetR family [Ensembl].... 0.04 OrthoFinder
CCL20481 BN171_550003 Transcriptional regulator, TetR family [Ensembl].... 0.03 OrthoFinder
CCP43769 Rv1019 Probable transcriptional regulatory protein (probably... 0.02 OrthoFinder
KNA49123 VCV51_030237 tetR family Bacterial regulatory protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001647 HTH_TetR 18 64
No external refs found!