Aliases : L2625_02920
Description : phosphosugar-binding transcriptional regulator, RpiR family [Ensembl]. Sugar isomerase (SIS), Helix-turn-helix protein RpiR [Interproscan].
Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AKI50704 | |
Cluster | HCCA: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT26243 | N559_4649 | hypothetical protein [Ensembl]. Helix-turn-helix domain,... | 0.03 | OrthoFinder | |
CCL18633 | BN171_2480008 | Transcriptional regulator, RpiR family [Ensembl].... | 0.03 | OrthoFinder | |
CRP05388 | ybbH_1 | putative HTH-type transcriptional regulator YbbH... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0097367 | carbohydrate derivative binding | IEA | Interproscan |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Enrichment |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Enrichment |
MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Enrichment |
BP | GO:0006109 | regulation of carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
MF | GO:0008233 | peptidase activity | IEP | Enrichment |
MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
MF | GO:0008961 | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity | IEP | Enrichment |
CC | GO:0009295 | nucleoid | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Enrichment |
MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0042157 | lipoprotein metabolic process | IEP | Enrichment |
BP | GO:0042158 | lipoprotein biosynthetic process | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Enrichment |
MF | GO:0047952 | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | IEP | Enrichment |
BP | GO:0052646 | alditol phosphate metabolic process | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
No external refs found! |