ADK86903 (rpsF, MPNE_0260)

Aliases : rpsF, MPNE_0260

Description : ribosomal protein S6 [Ensembl]. Ribosomal protein S6 [Interproscan].

Gene families : OG_02_0000463 (OrthoFinder) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ADK86903
Cluster	HCAA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AAC77157	rpsF, b4200	30S ribosomal subunit protein S6 [Ensembl]. Ribosomal...	0.17	OrthoFinder
AAL00200	spr1396, rpsF	30S Ribosomal protein S6 (S6) [Ensembl]. Ribosomal...	0.03	OrthoFinder
AAL23211	STM4391, rpsF	30S ribosomal subunit protein S6 [Ensembl]. Ribosomal...	0.18	OrthoFinder
AEA92694	rpsF, OG1RF_10007	30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6...	0.11	OrthoFinder
AGT26292	N559_4700	30S ribosomal protein S6 [Ensembl].	0.06	OrthoFinder
AHY40276	rpsF, CJ8421_05320	30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6...	0.14	OrthoFinder
AKI48020	rpsF, L2625_00045	ribosomal protein S6 [Ensembl]. Ribosomal protein S6...	0.02	OrthoFinder
AKP14207	rpsF, WX61_00118	30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6...	0.03	OrthoFinder
CBI65791	rpsF, HPB8_234	small subunit ribosomal protein S6 [Ensembl]. Ribosomal...	0.06	OrthoFinder
CCG26824	No alias	SSU ribosomal protein S6p [Ensembl]. Ribosomal protein...	0.08	OrthoFinder
CCP42775	rpsF, Rv0053	30S ribosomal protein S6 RpsF [Ensembl]. Ribosomal...	0.02	OrthoFinder
CPC89773	rpsF, ERS093114_01562	30S ribosomalprotein S6p [Ensembl]. Ribosomal protein S6...	0.15	OrthoFinder
CRO54025	rpsF	30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6...	0.13	OrthoFinder
EDJ91444	rpsF, CGSHi22421_06732	30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6...	0.07	OrthoFinder
KNA49059	VCV51_033834	ribosomal protein S6 [Ensembl]. Ribosomal protein S6...	0.14	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Enrichment
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Enrichment
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000529	Ribosomal_S6	2	88

External Links

No external refs found!

ADK86903 (rpsF, MPNE_0260)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation