1. Home
  2. Species
  3. Clostridioides difficile
  4. Sequence
  5. CCL17848

CCL17848 (BN171_1840008)


Aliases : BN171_1840008

Description : Transcriptional regulator, RmlC-type [Ensembl]. Cupin domain, Helix-turn-helix [Interproscan].


Gene families : OG_02_0000087 (OrthoFinder) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17848
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC74516 sutR, b1434 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AGT22454 N559_0658 helix-turn-helix motif-containing protein [Ensembl].... 0.04 OrthoFinder
AGT24926 N559_3268, PuuR DNA-binding transcriptional repressor PuuR [Ensembl].... 0.04 OrthoFinder
CRP16294 No alias anaerobic benzoate catabolism transcriptional regulator... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR001387 Cro/C1-type_HTH 9 63
IPR013096 Cupin_2 121 177
UniProtKB U3WUD8