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  5. CCL17870

CCL17870 (BN171_1900002)


Aliases : BN171_1900002

Description : Transcriptional regulator, RmlC-type [Ensembl]. Cupin domain, Helix-turn-helix [Interproscan].


Gene families : OG_02_0000087 (OrthoFinder) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17870
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC74516 sutR, b1434 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
CCL19006 BN171_280021 Transcriptional regulator, RmlC-type [Ensembl]. Cupin... 0.05 OrthoFinder
CRP16294 No alias anaerobic benzoate catabolism transcriptional regulator... 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
MF GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0071916 dipeptide transmembrane transporter activity IEP Enrichment
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Enrichment
MF GO:1904680 peptide transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001387 Cro/C1-type_HTH 13 62
IPR013096 Cupin_2 110 178
UniProtKB U3WVU9