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  5. AKP14942

AKP14942 (rplM, WX61_00876)


Aliases : rplM, WX61_00876

Description : 50S ribosomal protein L13 [Ensembl]. Ribosomal protein L13 [Interproscan].


Gene families : OG_02_0000475 (OrthoFinder) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP14942
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC76263 rplM, b3231 50S ribosomal subunit protein L13 [Ensembl]. Ribosomal... 0.03 OrthoFinder
AAL22214 STM3345, rplM 50S ribosomal subunit protein L13 [Ensembl]. Ribosomal... 0.04 OrthoFinder
ADK87111 rplM, MPNE_0722 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.04 OrthoFinder
AHY40659 rplM, CJ8421_07410 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CCG27317 L13Ae LSU ribosomal protein L13p (L13Ae) [Ensembl]. Ribosomal... 0.02 OrthoFinder
CCL20597 rplM, BN171_70037 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
CPD14646 rplM, ERS093114_02155 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CRP09073 rplM 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
KNA51829 VCV51_033517 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 14 138
No external refs found!