AKP15126 (rplB, WX61_01072)

Aliases : rplB, WX61_01072

Description : 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2 [Interproscan].

Gene families : OG_02_0000653 (OrthoFinder) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKP15126
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AAC76342	rplB, b3317	50S ribosomal subunit protein L2 [Ensembl]. Ribosomal...	0.19	OrthoFinder
AAK98995	spr0191, rplB	50S Ribosomal protein L2 [Ensembl]. Ribosomal Proteins...	0.12	OrthoFinder
AAL22300	STM3437, rplB	50S ribosomal subunit protein L2 [Ensembl]. Ribosomal...	0.16	OrthoFinder
ADK87182	rplB, MPNE_0197	ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2...	0.06	OrthoFinder
AHY40889	rplB, CJ8421_08585	50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins...	0.14	OrthoFinder
AKI50564	rplB, L2625_02774	ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2,...	0.08	OrthoFinder
CBI65720	rplB, HPB8_163	large subunit ribosomal protein L2 [Ensembl]. Ribosomal...	0.08	OrthoFinder
CCL20566	rplB, BN171_70006	50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins...	0.1	OrthoFinder
CCP43448	rplB, Rv0704	50S ribosomal protein L2 RplB [Ensembl]. Ribosomal...	0.07	OrthoFinder
CPD13600	rplB, ERS093114_02125	50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins...	0.1	OrthoFinder
CRO73845	rplB	50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins...	0.1	OrthoFinder
EDJ91357	CGSHi22421_04618	50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins...	0.09	OrthoFinder
KNA54975	VCV51_033158	ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2...	0.14	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Enrichment
MF	GO:0004521	endoribonuclease activity	IEP	Enrichment
MF	GO:0004525	ribonuclease III activity	IEP	Enrichment
MF	GO:0004834	tryptophan synthase activity	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006555	methionine metabolic process	IEP	Enrichment
BP	GO:0006568	tryptophan metabolic process	IEP	Enrichment
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Enrichment
BP	GO:0006586	indolalkylamine metabolic process	IEP	Enrichment
BP	GO:0009308	amine metabolic process	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0031554	regulation of DNA-templated transcription, termination	IEP	Enrichment
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Enrichment
BP	GO:0034220	ion transmembrane transport	IEP	Enrichment
BP	GO:0042430	indole-containing compound metabolic process	IEP	Enrichment
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0044106	cellular amine metabolic process	IEP	Enrichment
BP	GO:0046034	ATP metabolic process	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Enrichment
BP	GO:1902600	proton transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR022666	Rbsml_prot_L2_RNA-bd_dom	42	117
IPR022669	Ribosomal_L2_C	125	250

External Links

No external refs found!

AKP15126 (rplB, WX61_01072)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation