AKP15131 (rpmC, WX61_01077)

Aliases : rpmC, WX61_01077

Description : 50S ribosomal protein L29 [Ensembl]. Ribosomal L29 protein [Interproscan].

Gene families : OG_02_0000484 (OrthoFinder) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKP15131
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
AAC76337	rpmC, b3312	50S ribosomal subunit protein L29 [Ensembl]. Ribosomal...	0.14	OrthoFinder
AAK99001	spr0197, rpmC	50S Ribosomal protein L29 [Ensembl]. Ribosomal L29...	0.12	OrthoFinder
AAL22295	STM3432, rpmC	50S ribosomal subunit protein L29 [Ensembl]. Ribosomal...	0.14	OrthoFinder
AEA92846	rpmC, OG1RF_10159	50S ribosomal protein L29 [Ensembl]. Ribosomal L29...	0.06	OrthoFinder
AGT22250	N559_0442	50S ribosomal protein L29 [Ensembl].	0.05	OrthoFinder
AHY40884	CJ8421_08560	50S ribosomal protein L29 [Ensembl]. Ribosomal L29...	0.1	OrthoFinder
AKI50559	rpmC, L2625_02769	ribosomal protein L29 [Ensembl]. Ribosomal protein...	0.08	OrthoFinder
CCG27387	No alias	LSU ribosomal protein L29p (L35e) [Ensembl]. Ribosomal...	0.09	OrthoFinder
CCL20571	rpmC, BN171_70011	50S ribosomal protein L29 [Ensembl]. Ribosomal L29...	0.1	OrthoFinder
CCP43453	rpmC, Rv0709	50S ribosomal protein L29 RpmC [Ensembl]. Ribosomal L29...	0.1	OrthoFinder
CPD13781	rpmC, ERS093114_02130	50S ribosomal protein L29 [Ensembl]. Ribosomal L29...	0.18	OrthoFinder
CRO73990	rpmC	50S ribosomal protein L29 [Ensembl]. Ribosomal L29...	0.16	OrthoFinder
EDJ91362	CGSHi22421_04643	50S ribosomal protein L29 [Ensembl]. Ribosomal L29...	0.14	OrthoFinder
KNA54980	VCV51_033163	ribosomal L29 protein [Ensembl]. Ribosomal L29 protein...	0.12	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006417	regulation of translation	IEP	Enrichment
BP	GO:0006450	regulation of translational fidelity	IEP	Enrichment
BP	GO:0006754	ATP biosynthetic process	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009653	anatomical structure morphogenesis	IEP	Enrichment
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Enrichment
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Enrichment
BP	GO:0032502	developmental process	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Enrichment
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Enrichment
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Enrichment
BP	GO:0051246	regulation of protein metabolic process	IEP	Enrichment
BP	GO:0051302	regulation of cell division	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0072344	rescue of stalled ribosome	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment
BP	GO:1902600	proton transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001854	Ribosomal_L29/L35	4	60

External Links

No external refs found!

AKP15131 (rpmC, WX61_01077)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation