Coexpression cluster: Cluster_6 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006518 peptide metabolic process 13.29% (19/143) 2.74 0.0 0.0
GO:0043043 peptide biosynthetic process 13.29% (19/143) 2.74 0.0 0.0
GO:0043604 amide biosynthetic process 13.29% (19/143) 2.67 0.0 0.0
GO:0043603 cellular amide metabolic process 13.29% (19/143) 2.67 0.0 0.0
GO:0006412 translation 12.59% (18/143) 2.73 0.0 0.0
GO:0003735 structural constituent of ribosome 12.59% (18/143) 2.69 0.0 0.0
GO:0005198 structural molecule activity 12.59% (18/143) 2.69 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 14.69% (21/143) 2.45 0.0 0.0
GO:0044267 cellular protein metabolic process 13.29% (19/143) 2.55 0.0 0.0
GO:0005840 ribosome 11.89% (17/143) 2.68 0.0 0.0
GO:0043228 non-membrane-bounded organelle 11.89% (17/143) 2.65 0.0 0.0
GO:0043226 organelle 11.89% (17/143) 2.65 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 11.89% (17/143) 2.65 0.0 0.0
GO:0043229 intracellular organelle 11.89% (17/143) 2.65 0.0 0.0
GO:0009059 macromolecule biosynthetic process 14.69% (21/143) 2.33 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 16.08% (23/143) 1.92 0.0 0.0
GO:0019538 protein metabolic process 13.99% (20/143) 2.03 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 15.38% (22/143) 1.72 0.0 4e-06
GO:0044260 cellular macromolecule metabolic process 18.18% (26/143) 1.53 0.0 5e-06
GO:0044249 cellular biosynthetic process 16.78% (24/143) 1.33 1.2e-05 0.000177
GO:1901576 organic substance biosynthetic process 16.78% (24/143) 1.31 1.5e-05 0.000215
GO:0009058 biosynthetic process 16.78% (24/143) 1.08 0.000217 0.002951
GO:0005575 cellular_component 18.88% (27/143) 0.9 0.000695 0.009039
GO:1901564 organonitrogen compound metabolic process 16.78% (24/143) 0.95 0.000928 0.011559
GO:0043170 macromolecule metabolic process 18.88% (27/143) 0.87 0.001 0.011959
GO:0009199 ribonucleoside triphosphate metabolic process 2.1% (3/143) 3.18 0.002579 0.022029
GO:0006754 ATP biosynthetic process 2.1% (3/143) 3.18 0.002579 0.022029
GO:0009144 purine nucleoside triphosphate metabolic process 2.1% (3/143) 3.18 0.002579 0.022029
GO:0015985 energy coupled proton transport, down electrochemical gradient 2.1% (3/143) 3.18 0.002579 0.022029
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.1% (3/143) 3.18 0.002579 0.022029
GO:0015986 ATP synthesis coupled proton transport 2.1% (3/143) 3.18 0.002579 0.022029
GO:0009142 nucleoside triphosphate biosynthetic process 2.1% (3/143) 3.18 0.002579 0.022029
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.1% (3/143) 3.18 0.002579 0.022029
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.1% (3/143) 3.18 0.002579 0.022029
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.1% (3/143) 3.18 0.002579 0.022029
GO:0034641 cellular nitrogen compound metabolic process 18.88% (27/143) 0.77 0.002886 0.023971
GO:0110165 cellular anatomical entity 16.78% (24/143) 0.82 0.003155 0.025495
GO:0003743 translation initiation factor activity 1.4% (2/143) 3.92 0.004358 0.031027
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.4% (2/143) 3.92 0.004358 0.031027
GO:0006413 translational initiation 1.4% (2/143) 3.92 0.004358 0.031027
GO:0015252 proton channel activity 1.4% (2/143) 3.92 0.004358 0.031027
GO:0005261 cation channel activity 1.4% (2/143) 3.92 0.004358 0.031027
GO:0008135 translation factor activity, RNA binding 2.1% (3/143) 2.92 0.004908 0.0319
GO:0045182 translation regulator activity 2.1% (3/143) 2.92 0.004908 0.0319
GO:0090079 translation regulator activity, nucleic acid binding 2.1% (3/143) 2.92 0.004908 0.0319
GO:0009141 nucleoside triphosphate metabolic process 2.1% (3/143) 2.92 0.004908 0.0319
GO:0003723 RNA binding 6.29% (9/143) 1.41 0.00527 0.033525
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_2 0.03 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.072 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.077 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_7 0.045 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.03 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.034 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.089 OrthoFinder Compare
Escherichia coli HCCA Cluster_38 0.038 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_17 0.079 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.076 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.079 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.036 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.075 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.031 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.067 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.049 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.085 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.034 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.111 OrthoFinder Compare
Salmonella enterica HCCA Cluster_44 0.027 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.109 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.062 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.061 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.056 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.111 OrthoFinder Compare
Sequences (143) (download table)

InterPro Domains

GO Terms

Family Terms