AKP15138 (rplF, WX61_01084)


Aliases : rplF, WX61_01084

Description : 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6 [Interproscan].


Gene families : OG_02_0000395 (OrthoFinder) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP15138
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC76330 rplF, b3305 50S ribosomal subunit protein L6 [Ensembl]. Ribosomal... 0.11 OrthoFinder
AAK99008 spr0204, rplF 50S Ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.1 OrthoFinder
AAL22288 STM3425, rplF 50S ribosomal subunit protein L6 [Ensembl]. Ribosomal... 0.13 OrthoFinder
ADK87044 rplF, MPNE_0209 ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.1 OrthoFinder
AEA92853 rplF, OG1RF_10166 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.12 OrthoFinder
AGT22257 N559_0449 50S ribosomal protein L6 [Ensembl]. alpha-beta domain... 0.09 OrthoFinder
AHY40877 rplF, CJ8421_08525 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.17 OrthoFinder
AKI50552 rplF, L2625_02762 ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.13 OrthoFinder
CBI65732 rplF, HPB8_175 large subunit ribosomal protein L6 [Ensembl]. Ribosomal... 0.12 OrthoFinder
CCG27394 No alias LSU ribosomal protein L6p (L9e) [Ensembl]. Ribosomal... 0.08 OrthoFinder
CCL20578 rplF, BN171_70018 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.12 OrthoFinder
CCP43463 rplF, Rv0719 50S ribosomal protein L6 RplF [Ensembl]. Ribosomal... 0.08 OrthoFinder
CPD14024 rplF, ERS093114_02137 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.16 OrthoFinder
CRO74186 rplF 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.12 OrthoFinder
EDJ91371 rplF, CGSHi22421_04688 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.13 OrthoFinder
KNA54987 VCV51_033170 ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006450 regulation of translational fidelity IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006481 C-terminal protein methylation IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0018410 C-terminal protein amino acid modification IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043687 post-translational protein modification IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Enrichment
BP GO:0072344 rescue of stalled ribosome IEP Enrichment
InterPro domains Description Start Stop
IPR020040 Ribosomal_L6_a/b-dom 11 82
IPR020040 Ribosomal_L6_a/b-dom 90 164
No external refs found!