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  5. AKP15144

AKP15144 (rpsM, WX61_01090)


Aliases : rpsM, WX61_01090

Description : 30S ribosomal protein S13 [Ensembl]. Ribosomal protein S13/S18 [Interproscan].


Gene families : OG_02_0000825 (OrthoFinder) Phylogenetic Tree(s): OG0000825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP15144
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AEA92862 rpsM, OG1RF_10175 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AHY40765 rpsM, CJ8421_07965 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AKI50543 rpsM, L2625_02753 ribosomal protein S13 [Ensembl]. Ribosomal protein S13... 0.06 OrthoFinder
CBI65740 rpsM, HPB8_183 small subunit ribosomal protein S13 [Ensembl]. Ribosomal... 0.05 OrthoFinder
CCG27403 No alias SSU ribosomal protein S13p (S18e) [Ensembl]. Ribosomal... 0.05 OrthoFinder
CCL20588 rpsM, BN171_70028 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
CCP46282 rpsM, Rv3460c 30S ribosomal protein S13 RpsM [Ensembl]. Ribosomal... 0.05 OrthoFinder
CPD14335 rpsM, ERS093114_02146 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
CRO74398 rpsM 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Enrichment
BP GO:0006450 regulation of translational fidelity IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006481 C-terminal protein methylation IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008962 phosphatidylglycerophosphatase activity IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0018410 C-terminal protein amino acid modification IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043687 post-translational protein modification IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 3 108
No external refs found!