AKP15308 (msbA, WX61_01259)

Aliases : msbA, WX61_01259

Description : Lipid A export ATP-binding/permease protein MsbA [Ensembl]. ABC transporter transmembrane region [Interproscan].

Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKP15308
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AAC74000	msbA, b0914	lipid ABC transporter permease/ATPase [Ensembl]. ABC...	0.03	OrthoFinder
AAL00019	spr1215, ABC-N/P	ABC transporter ATP-binding/membrane-spanning...	0.04	OrthoFinder
AAL00020	spr1216, ABC-N/P	ABC transporter ATP-binding/membrane-spanning...	0.03	OrthoFinder
AAL00460	spr1657, ABC-N/P	ABC transporter ATP-binding/membrane spanning...	0.03	OrthoFinder
AAL19918	STM0984, msbA	multicopy repressor of htrB transport protein; ABC...	0.02	OrthoFinder
AEA93356	OG1RF_10669	ABC superfamily ATP binding cassette transporter,...	0.04	OrthoFinder
CCL18600	BN171_2440041	ABC-type transport system, multidrug-family...	0.02	OrthoFinder
CCL19310	BN171_3020022	ABC-type transport system, multidrug-family...	0.02	OrthoFinder
CRO55966	msbA	Lipid A export ATP-binding/permease protein MsbA...	0.04	OrthoFinder
EDJ91217	CGSHi22421_01824	fused lipid transporter subunits of ABC superfamily:...	0.05	OrthoFinder
KNA59439	VCV51_031273, MsbA	lipid A export permease/ATP-binding protein MsbA...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002949	tRNA threonylcarbamoyladenosine modification	IEP	Enrichment
MF	GO:0003951	NAD+ kinase activity	IEP	Enrichment
MF	GO:0004055	argininosuccinate synthase activity	IEP	Enrichment
MF	GO:0004107	chorismate synthase activity	IEP	Enrichment
MF	GO:0004180	carboxypeptidase activity	IEP	Enrichment
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Enrichment
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006741	NADP biosynthetic process	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Enrichment
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Enrichment
CC	GO:0009349	riboflavin synthase complex	IEP	Enrichment
BP	GO:0016053	organic acid biosynthetic process	IEP	Enrichment
MF	GO:0016657	oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0032506	cytokinetic process	IEP	Enrichment
MF	GO:0032977	membrane insertase activity	IEP	Enrichment
MF	GO:0033739	preQ1 synthase activity	IEP	Enrichment
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
MF	GO:0043772	acyl-phosphate glycerol-3-phosphate acyltransferase activity	IEP	Enrichment
BP	GO:0044283	small molecule biosynthetic process	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
BP	GO:0070525	tRNA threonylcarbamoyladenosine metabolic process	IEP	Enrichment
BP	GO:0090529	cell septum assembly	IEP	Enrichment
MF	GO:0140104	molecular carrier activity	IEP	Enrichment
MF	GO:0140597	protein carrier activity	IEP	Enrichment
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	36	330
IPR003439	ABC_transporter-like_ATP-bd	392	541

External Links

No external refs found!

AKP15308 (msbA, WX61_01259)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation