AKP15308 (msbA, WX61_01259)

Aliases : msbA, WX61_01259

Description : Lipid A export ATP-binding/permease protein MsbA [Ensembl]. ABC transporter transmembrane region [Interproscan].

Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKP15308
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC74000 msbA, b0914 lipid ABC transporter permease/ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAL00019 spr1215, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.04 OrthoFinder
AAL00020 spr1216, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.03 OrthoFinder
AAL00460 spr1657, ABC-N/P ABC transporter ATP-binding/membrane spanning... 0.03 OrthoFinder
AAL19918 STM0984, msbA multicopy repressor of htrB transport protein; ABC... 0.02 OrthoFinder
AEA93356 OG1RF_10669 ABC superfamily ATP binding cassette transporter,... 0.04 OrthoFinder
CCL18600 BN171_2440041 ABC-type transport system, multidrug-family... 0.02 OrthoFinder
CCL19310 BN171_3020022 ABC-type transport system, multidrug-family... 0.02 OrthoFinder
CRO55966 msbA Lipid A export ATP-binding/permease protein MsbA... 0.04 OrthoFinder
EDJ91217 CGSHi22421_01824 fused lipid transporter subunits of ABC superfamily:... 0.05 OrthoFinder
KNA59439 VCV51_031273, MsbA lipid A export permease/ATP-binding protein MsbA... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0032506 cytokinetic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0033739 preQ1 synthase activity IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0043772 acyl-phosphate glycerol-3-phosphate acyltransferase activity IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0090529 cell septum assembly IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 36 330
IPR003439 ABC_transporter-like_ATP-bd 392 541
No external refs found!