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  5. CCL17952

CCL17952 (BN171_1970021)


Aliases : BN171_1970021

Description : Transcriptional regulator, HTH-type [Ensembl]. Cupin domain, Helix-turn-helix [Interproscan].


Gene families : OG_02_0000087 (OrthoFinder) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17952
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AAC74516 sutR, b1434 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AGT22454 N559_0658 helix-turn-helix motif-containing protein [Ensembl].... 0.05 OrthoFinder
AGT24926 N559_3268, PuuR DNA-binding transcriptional repressor PuuR [Ensembl].... 0.03 OrthoFinder
AGT26655 N559_5078 putative helix-turn-helix regulatory protein [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001387 Cro/C1-type_HTH 10 61
IPR013096 Cupin_2 109 176
UniProtKB U3WV83