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  5. CCL18208

CCL18208 (BN171_2160004)


Aliases : BN171_2160004

Description : Transcriptional regulator, LysR family [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL18208
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC75458 xapR, b2405 transcriptional activator of xapAB [Ensembl]. LysR... 0.03 OrthoFinder
AAL20406 STM1487, ynfL putative LysR family transcriptional regulator... 0.03 OrthoFinder
AAL21995 STM3121 putative LysR family transcriptional regulator... 0.02 OrthoFinder
AAL22693 STM3834 putative LysR family transcriptional regulator... 0.03 OrthoFinder
AEA93759 OG1RF_11072 transcriptional regulator [Ensembl]. LysR substrate... 0.03 OrthoFinder
AEA93760 OG1RF_11073 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AEA94210 OG1RF_11523 LysR family transcriptional regulator [Ensembl].... 0.03 OrthoFinder
AEA94928 OG1RF_12241 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT23181 N559_1423 LysR family transcriptional regulator [Ensembl]. LysR... 0.04 OrthoFinder
AGT23273 N559_1520, CynR DNA-binding transcriptional regulator CynR [Ensembl].... 0.03 OrthoFinder
AGT23447 N559_1705 LysR family transcriptional regulator [Ensembl]. LysR... 0.04 OrthoFinder
AGT24793 N559_3132 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT26415 N559_4829 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT26606 N559_5029, OxyR DNA-binding transcriptional regulator OxyR [Ensembl].... 0.03 OrthoFinder
AKI48958 L2625_01040 transcriptional regulator, LysR family [Ensembl].... 0.03 OrthoFinder
AKI50144 L2625_02308 transcriptional regulator, LysR family [Ensembl]. LysR,... 0.04 OrthoFinder
CRO27185 oxyR_1 Morphology and auto-aggregation control protein... 0.03 OrthoFinder
CRO86371 oxyR_2 Morphology and auto-aggregation control protein... 0.01 OrthoFinder
EDJ90156 CGSHi22421_05987 DNA-binding transcriptional regulator OxyR [Ensembl].... 0.03 OrthoFinder
KNA54936 VCV51_031768 LysR substrate binding domain-containing protein... 0.04 OrthoFinder
KNA56848 VCV51_032860 LysR substrate binding domain-containing protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 93 292
IPR000847 Tscrpt_reg_HTH_LysR 5 64
UniProtKB U3WVH4