AHY39592 (CJ8421_01675)

Aliases : CJ8421_01675

Description : DNA polymerase I [Ensembl]. 5'-3' exonuclease, 3'-5' exonuclease, DNA polymerase family A [Interproscan].

Gene families : OG_02_0000357 (OrthoFinder) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AHY39592
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AAC76861 polA, b3863 5' to 3' DNA polymerase and 3' to 5'/5' to 3'... 0.03 OrthoFinder
AAK98836 spr0032, polA DNA polymerase I [Ensembl]. 5'-3' exonuclease, DNA... 0.03 OrthoFinder
CCP44393 polA, Rv1629 Probable DNA polymerase I PolA [Ensembl]. 5'-3'... 0.02 OrthoFinder
CPC75542 ypcP, ERS093114_01206 DNA polymerase I [Ensembl]. 5'-3' exonuclease [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
CC GO:0019008 molybdopterin synthase complex IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR020045 DNA_polI_H3TH 167 256
IPR001098 DNA-dir_DNA_pol_A_palm_dom 510 877
IPR020046 5-3_exonucl_a-hlix_arch_N 4 166
IPR002562 3'-5'_exonuclease_dom 300 477
No external refs found!