CCL18633 (BN171_2480008)

Aliases : BN171_2480008

Description : Transcriptional regulator, RpiR family [Ensembl]. Helix-turn-helix domain, SIS domain [Interproscan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL18633
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AAC74923 yebK, b1853 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AAC77050 alsR, b4089 d-allose-inducible als operon transcriptional repressor;... 0.03 OrthoFinder
AAL20803 STM1887, yebK putative transcriptional regulator [Ensembl]. SIS... 0.04 OrthoFinder
AGT26100 N559_4495 transcriptional regulator [Ensembl]. Helix-turn-helix... 0.03 OrthoFinder
AGT26243 N559_4649 hypothetical protein [Ensembl]. Helix-turn-helix domain,... 0.03 OrthoFinder
AKI50704 L2625_02920 phosphosugar-binding transcriptional regulator, RpiR... 0.03 OrthoFinder
AKI50732 L2625_02948 phosphosugar-binding transcriptional regulator, RpiR... 0.03 OrthoFinder
CPC91357 rpiR, ERS093114_01611 Sialic acid utilization regulator%2C RpiR family... 0.01 OrthoFinder
CPD10961 ybbH_3, ERS093114_02058 RpiR family transcriptional regulator [Ensembl]. SIS... 0.03 OrthoFinder
CRP05388 ybbH_1 putative HTH-type transcriptional regulator YbbH... 0.03 OrthoFinder
KNA53875 VCV51_030812, HexR DNA-binding transcriptional regulator HexR [Ensembl].... 0.06 OrthoFinder
KNA58972 VCV51_031233 transcriptional regulator [Ensembl]. SIS domain,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0097367 carbohydrate derivative binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000281 HTH_RpiR 1 76
IPR001347 SIS_dom 126 254
UniProtKB U3WWR4