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  5. AAL19180

AAL19180 (STM0216, rpsB)


Aliases : STM0216, rpsB

Description : 30S ribosomal subunit protein S2 [Ensembl]. Ribosomal protein S2 [Interproscan].


Gene families : OG_02_0000332 (OrthoFinder) Phylogenetic Tree(s): OG0000332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19180
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC73280 rpsB, b0169 30S ribosomal subunit protein S2 [Ensembl]. Ribosomal... 0.56 OrthoFinder
AAL00822 spr2020, rpsB 30S Ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.26 OrthoFinder
ADK87275 rpsB, MPNE_0240 ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.06 OrthoFinder
AEA94520 rpsB, OG1RF_11833 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.12 OrthoFinder
AGT25854 N559_4232 30S ribosomal protein S2 [Ensembl]. 0.1 OrthoFinder
AHY40386 rpsB, CJ8421_05895 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.28 OrthoFinder
AKI49655 rpsB, L2625_01768 ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.12 OrthoFinder
AKP14987 rpsB, WX61_00924 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.12 OrthoFinder
CBI67239 rpsB, HPB8_1682 small subunit ribosomal protein S2 [Ensembl]. Ribosomal... 0.16 OrthoFinder
CCG26655 No alias SSU ribosomal protein S2p (SAe) [Ensembl]. Ribosomal... 0.15 OrthoFinder
CCL18526 rpsB, BN171_2410008 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.15 OrthoFinder
CCP45692 rpsB, Rv2890c 30S ribosomal protein S2 RpsB [Ensembl]. Ribosomal... 0.24 OrthoFinder
CPC35319 rpsB, ERS093114_00168 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.06 OrthoFinder
CRO13952 rpsB 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.38 OrthoFinder
EDJ91697 secA, CGSHi22421_08078 preprotein translocase subunit SecA [Ensembl]. Ribosomal... 0.07 OrthoFinder
EDJ91698 CGSHi22421_08083 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.12 OrthoFinder
KNA52712 VCV51_031518 ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.33 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 9 224
No external refs found!