Coexpression cluster: Cluster_23 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044267 cellular protein metabolic process 60.38% (32/53) 5.54 0.0 0.0
GO:0043043 peptide biosynthetic process 60.38% (32/53) 5.9 0.0 0.0
GO:0043226 organelle 60.38% (32/53) 5.81 0.0 0.0
GO:0043228 non-membrane-bounded organelle 60.38% (32/53) 5.81 0.0 0.0
GO:0043229 intracellular organelle 60.38% (32/53) 5.93 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 60.38% (32/53) 5.93 0.0 0.0
GO:0043603 cellular amide metabolic process 60.38% (32/53) 5.75 0.0 0.0
GO:0006518 peptide metabolic process 60.38% (32/53) 5.9 0.0 0.0
GO:0006412 translation 60.38% (32/53) 5.97 0.0 0.0
GO:0005840 ribosome 60.38% (32/53) 6.0 0.0 0.0
GO:0043604 amide biosynthetic process 60.38% (32/53) 5.84 0.0 0.0
GO:0005198 structural molecule activity 62.26% (33/53) 5.74 0.0 0.0
GO:0003735 structural constituent of ribosome 62.26% (33/53) 5.98 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 62.26% (33/53) 5.13 0.0 0.0
GO:0009059 macromolecule biosynthetic process 62.26% (33/53) 4.99 0.0 0.0
GO:0019538 protein metabolic process 60.38% (32/53) 4.77 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 62.26% (33/53) 4.55 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 60.38% (32/53) 4.34 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 62.26% (33/53) 3.96 0.0 0.0
GO:0044249 cellular biosynthetic process 62.26% (33/53) 3.79 0.0 0.0
GO:1901576 organic substance biosynthetic process 62.26% (33/53) 3.71 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 66.04% (35/53) 3.29 0.0 0.0
GO:0043170 macromolecule metabolic process 66.04% (35/53) 3.28 0.0 0.0
GO:0009058 biosynthetic process 62.26% (33/53) 3.43 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 60.38% (32/53) 3.3 0.0 0.0
GO:0006807 nitrogen compound metabolic process 66.04% (35/53) 2.77 0.0 0.0
GO:0044237 cellular metabolic process 66.04% (35/53) 2.6 0.0 0.0
GO:0044238 primary metabolic process 66.04% (35/53) 2.58 0.0 0.0
GO:0071704 organic substance metabolic process 66.04% (35/53) 2.32 0.0 0.0
GO:0008152 metabolic process 66.04% (35/53) 2.09 0.0 0.0
GO:0110165 cellular anatomical entity 62.26% (33/53) 2.17 0.0 0.0
GO:0005575 cellular_component 62.26% (33/53) 2.12 0.0 0.0
GO:0009987 cellular process 67.92% (36/53) 1.64 0.0 0.0
GO:0019843 rRNA binding 9.43% (5/53) 6.42 0.0 0.0
GO:0008150 biological_process 69.81% (37/53) 1.05 0.0 0.0
GO:0003674 molecular_function 75.47% (40/53) 0.87 0.0 1e-06
GO:0003723 RNA binding 13.21% (7/53) 3.23 7e-06 2.3e-05
GO:0003676 nucleic acid binding 20.75% (11/53) 1.64 0.000592 0.001855
GO:0042254 ribosome biogenesis 1.89% (1/53) 6.42 0.011638 0.032208
GO:0022613 ribonucleoprotein complex biogenesis 1.89% (1/53) 6.42 0.011638 0.032208
GO:0044085 cellular component biogenesis 1.89% (1/53) 6.42 0.011638 0.032208
GO:0008097 5S rRNA binding 1.89% (1/53) 6.42 0.011638 0.032208
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity 1.89% (1/53) 6.42 0.011638 0.032208
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_2 0.053 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.163 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_12 0.04 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.162 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_7 0.089 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.078 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.126 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.368 OrthoFinder Compare
Escherichia coli HCCA Cluster_38 0.059 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_7 0.055 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_8 0.057 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_17 0.354 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.227 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.21 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.093 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.073 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.192 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.059 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_1 0.033 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_3 0.057 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.206 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_6 0.031 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.147 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.05 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.111 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.16 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_51 0.062 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.055 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_19 0.036 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.435 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.209 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.134 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.112 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_7 0.03 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.06 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.574 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.072 OrthoFinder Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms