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AAL19305 (STM0351)


Aliases : STM0351

Description : putative cation efflux system protein [Ensembl]. AcrB/AcrD/AcrF family [Interproscan].


Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19305
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC75136 mdtB, b2075 multidrug efflux system, subunit B [Ensembl].... 0.02 OrthoFinder
AAC75137 mdtC, b2076 multidrug efflux system, subunit C [Ensembl].... 0.05 OrthoFinder
AAC76298 acrF, b3266 multidrug efflux system protein [Ensembl].... 0.07 OrthoFinder
AAL22260 STM3391, acrF RND family multidrug transport protein [Ensembl].... 0.05 OrthoFinder
AGT22282 N559_0474, BpeB inner membrane multidrug efflux protein BpeB [Ensembl].... 0.03 OrthoFinder
CCL18817 BN171_2660006 Putative multidrug efflux pump [Ensembl]. AcrB/AcrD/AcrF... 0.02 OrthoFinder
CRN65212 acrB_1 Acriflavine resistance protein B [Ensembl].... 0.03 OrthoFinder
CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.01 OrthoFinder
CRP58341 mdtB_2 Multidrug transporter MdtB [Ensembl]. AcrB/AcrD/AcrF... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0016032 viral process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 4 1038
No external refs found!