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  5. AAL19306

AAL19306 (STM0352)


Aliases : STM0352

Description : putative cation efflux pump [Ensembl]. Barrel-sandwich domain of CusB or HlyD membrane-fusion [Interproscan].


Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19306
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76297 acrE, b3265 cytoplasmic membrane lipoprotein [Ensembl]. HlyD... 0.04 OrthoFinder
AGT21931 N559_0105 EefA [Ensembl]. Barrel-sandwich domain of CusB or HlyD... 0.04 OrthoFinder
CRO88312 mexA_1 Multidrug resistance protein MexA precursor [Ensembl].... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008948 oxaloacetate decarboxylase activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0016032 viral process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0035725 sodium ion transmembrane transport IEP Enrichment
BP GO:0036376 sodium ion export across plasma membrane IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0070839 metal ion export IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0140115 export across plasma membrane IEP Enrichment
InterPro domains Description Start Stop
IPR032317 HlyD_D23 72 298
No external refs found!