AAL19580 (STM0629, cspE)

Aliases : STM0629, cspE

Description : RNA chaperone, negative regulator of cspA transcription [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].

Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL19580
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method	Actions
AAC73967	cspD, b0880	inhibitor of DNA replication, cold shock protein homolog...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	5	68

External Links

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