AAL19603 (STM0652)


Aliases : STM0652

Description : putative sigma-54 dependent transcriptional regulator [Ensembl]. Sigma-54 interaction domain, Propionate catabolism activator [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19603
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC74385 pspF, b1303 psp operon transcriptional activator [Ensembl]. Sigma-54... 0.05 OrthoFinder
AAC75607 glrR, b2554 response regulator regulating glmY sRNA in two-component... 0.03 OrthoFinder
AAC75751 norR, b2709 anaerobic nitric oxide reductase DNA-binding... 0.05 OrthoFinder
AGT22959 N559_1193 anaerobic nitric oxide reductase transcription regulator... 0.02 OrthoFinder
CRP62097 rocR Arginine utilization regulatory protein RocR [Ensembl].... 0.03 OrthoFinder
KNA60791 VCV51_032053 sigma-54 interaction domain-containing protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR010524 Sig_transdc_resp-reg_PrpR_N 32 197
IPR002078 Sigma_54_int 332 498
No external refs found!