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AAL20028 (STM1096, copR)


Aliases : STM1096, copR

Description : Copper resistance transcriptional regulatory protein [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20028
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC74680 rstA, b1608 response regulator of RstAB two-component system... 0.04 OrthoFinder
AAC75035 hprR, b1969 response regulator family protein [Ensembl].... 0.04 OrthoFinder
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.07 OrthoFinder
AAC77074 basR, b4113 response regulator in two-component regulatory system... 0.04 OrthoFinder
AAK99382 spr0578, rr09 Response regulator [Ensembl]. Helix-turn-helix domain,... 0.03 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.05 OrthoFinder
AGT22533 N559_0740, QseB DNA-binding transcriptional regulator QseB [Ensembl].... 0.02 OrthoFinder
AGT24481 N559_2808, RstA DNA-binding transcriptional regulator RstA [Ensembl].... 0.05 OrthoFinder
AGT25177 N559_3529, BasR DNA-binding transcriptional regulator BasR [Ensembl].... 0.03 OrthoFinder
AGT26636 N559_5059, CpxR DNA-binding transcriptional regulator CpxR [Ensembl].... 0.04 OrthoFinder
CCL16989 BN171_1060003 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL19656 BN171_3350005 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL20068 BN171_3690012 Two-component response regulator, CheY family [Ensembl].... 0.02 OrthoFinder
CCL20655 BN171_830005 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCP43225 regX3, Rv0491 Two component sensory transduction protein RegX3... 0.02 OrthoFinder
CCP43777 kdpE, Rv1027c Probable transcriptional regulatory protein KdpE... 0.02 OrthoFinder
CCP43784 trcR, Rv1033c Two component transcriptional regulator TrcR [Ensembl].... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.05 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.06 OrthoFinder
CPC86428 phoP, ERS093114_01516 Alkaline phosphatase synthesis transcriptional... 0.04 OrthoFinder
CRN89694 tctD Transcriptional regulatory protein tctD [Ensembl].... 0.03 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.04 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.08 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.04 OrthoFinder
CRP27775 kdpE KDP operon transcriptional regulatory protein KdpE... 0.04 OrthoFinder
CRP32671 czcR_3 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.05 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.04 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.06 OrthoFinder
KNA52268 VCV51_033433 response regulator receiver domain-containing protein... 0.02 OrthoFinder
KNA60550 VCV51_032221 response regulator receiver domain-containing protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001867 OmpR/PhoB-type_DNA-bd 165 240
IPR001789 Sig_transdc_resp-reg_receiver 25 134
No external refs found!