AAL20600 (STM1683, tyrR)


Aliases : STM1683, tyrR

Description : transcriptional regulator of aromatic amino acid biosynthesis genes (aroF, aroG, tyrA) and aromatic amino acid transport [Ensembl]. Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20600
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AAC74405 tyrR, b1323 aromatic amino acid biosynthesis and transport regulon... 0.08 OrthoFinder
AAC75773 fhlA, b2731 formate hydrogenlyase transcriptional activator... 0.04 OrthoFinder
AAC75907 ygeV, b2869 putative sigma-54-interacting transcriptional activator... 0.03 OrthoFinder
AGT22935 N559_1166, FhlA formate hydrogenlyase transcriptional activator FhlA... 0.04 OrthoFinder
AGT22959 N559_1193 anaerobic nitric oxide reductase transcription regulator... 0.04 OrthoFinder
CRO39560 dctD_1 C4-dicarboxylate transport transcriptional regulatory... 0.02 OrthoFinder
CRP62097 rocR Arginine utilization regulatory protein RocR [Ensembl].... 0.03 OrthoFinder
KNA50402 VCV51_031428 sigma-54 interaction domain-containing protein... 0.04 OrthoFinder
KNA55256 VCV51_033069 sigma-54 interaction domain-containing protein... 0.03 OrthoFinder
KNA58588 VCV51_031119 psp operon transcriptional activator [Ensembl]. Sigma-54... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0010565 regulation of cellular ketone metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0019216 regulation of lipid metabolic process IEP Enrichment
BP GO:0019217 regulation of fatty acid metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0062012 regulation of small molecule metabolic process IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002078 Sigma_54_int 206 365
IPR030828 HTH_TypR 458 507
No external refs found!