Aliases : cbiM, BN171_270001
Description : Cobalamin biosynthesis protein [Ensembl]. Cobalt uptake substrate-specific transmembrane region [Interproscan].
Gene families : OG_02_0002122 (OrthoFinder) Phylogenetic Tree(s): OG0002122_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CCL18870 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL20927 | STM2023, cbiM | synthesis of vitamin B12 adenosyl cobalamide precursor... | 0.05 | OrthoFinder | |
AGT22832 | N559_1053, CbiM | cobalt transport protein CbiM [Ensembl]. | 0.05 | OrthoFinder | |
AKI49132 | cbiM, L2625_01221 | cobalamin biosynthesis protein [Ensembl]. Metal... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006824 | cobalt ion transport | IEP | Enrichment |
BP | GO:0009235 | cobalamin metabolic process | IEP | Enrichment |
BP | GO:0009236 | cobalamin biosynthetic process | IEP | Enrichment |
MF | GO:0015087 | cobalt ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
BP | GO:0034220 | ion transmembrane transport | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002751 | CbiM/NikMN | 27 | 231 |
UniProtKB | U3WYK5 |