1. Home
  2. Species
  3. Clostridioides difficile
  4. Sequence
  5. CCL18889

CCL18889 (BN171_2700012)


Aliases : BN171_2700012

Description : Putative tRNA-nucleotidyltransferase/Poly(A) polymerase family member [Ensembl]. Probable RNA and SrmB- binding site of polymerase A, tRNA nucleotidyltransferase domain 2 putative, Poly A polymerase head domain [Interproscan].


Gene families : OG_02_0000970 (OrthoFinder) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL18889
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAL19148 STM0184, pcnB poly(A) polymerase I [Ensembl]. Poly A polymerase head... 0.02 OrthoFinder
AKP15791 pcnB, WX61_01756 Poly(A) polymerase I precursor [Ensembl]. Poly A... 0.06 OrthoFinder
CRO21514 pcnB Poly(A) polymerase I precursor [Ensembl]. Poly A... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
BP GO:0006011 UDP-glucose metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR032828 PolyA_RNA-bd 171 228
IPR032810 CCA-adding_enz_C 296 439
IPR002646 PolA_pol_head_dom 24 143
UniProtKB U3X125