AAL21562 (STM2673, rplS)

Aliases : STM2673, rplS

Description : 50S ribosomal subunit protein L19 [Ensembl]. Ribosomal protein L19 [Interproscan].

Gene families : OG_02_0000375 (OrthoFinder) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL21562
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AAC75655	rplS, b2606	50S ribosomal subunit protein L19 [Ensembl]. Ribosomal...	0.61	OrthoFinder
AAK99974	spr1171, rplS	50S Ribosomal protein L19 [Ensembl]. Ribosomal protein...	0.11	OrthoFinder
ADK87174	rplS, MPNE_0768	ribosomal protein L19 [Ensembl]. Ribosomal protein L19...	0.16	OrthoFinder
AEA94251	rplS, OG1RF_11564	50S ribosomal protein L19 [Ensembl]. Ribosomal protein...	0.26	OrthoFinder
AGT23087	N559_1325	50S ribosomal protein L19 [Ensembl].	0.07	OrthoFinder
AHY39943	rplS, CJ8421_03520	50S ribosomal protein L19 [Ensembl]. Ribosomal protein...	0.29	OrthoFinder
CBI65911	rplS, HPB8_354	large subunit ribosomal protein L19 [Ensembl]. Ribosomal...	0.07	OrthoFinder
CCG27123	No alias	LSU ribosomal protein L19p [Ensembl]. Ribosomal protein...	0.1	OrthoFinder
CCL17411	rplS, BN171_1490005	50S ribosomal protein L19 [Ensembl]. Ribosomal protein...	0.1	OrthoFinder
CCP45706	rplS, Rv2904c	50S ribosomal protein L19 RplS [Ensembl]. Ribosomal...	0.13	OrthoFinder
CPC35808	rplS, ERS093114_00183	50S ribosomal protein L19 [Ensembl]. Ribosomal protein...	0.11	OrthoFinder
CRO16764	rplS	50S ribosomal protein L19 [Ensembl]. Ribosomal protein...	0.28	OrthoFinder
EDJ90613	CGSHi22421_01372	anaerobic C4-dicarboxylate transporter [Ensembl]....	0.13	OrthoFinder
KNA51825	VCV51_033512	ribosomal protein L19 [Ensembl]. Ribosomal protein L19...	0.27	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
MF	GO:0008320	protein transmembrane transporter activity	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
MF	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0032774	RNA biosynthetic process	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:0140318	protein transporter activity	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001857	Ribosomal_L19	3	113

External Links

No external refs found!

AAL21562 (STM2673, rplS)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation