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AAL21729 (STM2849, hycE)


Aliases : STM2849, hycE

Description : hydrogenase 3, large subunit [Ensembl]. Nickel-dependent hydrogenase, Respiratory-chain NADH dehydrogenase [Interproscan].


Gene families : OG_02_0002901 (OrthoFinder) Phylogenetic Tree(s): OG0002901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21729
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC75763 hycE, b2721 hydrogenase 3, large subunit [Ensembl]. Nickel-dependent... 0.39 OrthoFinder
AGT22944 N559_1177 hydrogenase 3, large subunit (part of FHL complex) [Ensembl]. 0.15 OrthoFinder
CCP42812 hycE, Rv0087 Possible formate hydrogenase HycE (FHL) [Ensembl].... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA Interproscan
MF GO:0016151 nickel cation binding IEA Interproscan
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEA Interproscan
MF GO:0048038 quinone binding IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001135 NADH_Q_OxRdtase_suD 296 464
IPR001135 NADH_Q_OxRdtase_suD 466 537
IPR001501 Ni-dep_hyd_lsu 218 286
IPR001268 NADH_UbQ_OxRdtase_30kDa_su 36 152
No external refs found!