Aliases : STM2864, sitD
Description : fur regulated Salmonella iron transporter [Ensembl]. ABC 3 transport family [Interproscan].
Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL21744 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC74929 | znuB, b1859 | zinc ABC transporter permease [Ensembl]. ABC 3 transport... | 0.01 | OrthoFinder | |
AAL00297 | spr1493, psaC | ABC transporter membrane-spanning permease-manganese... | 0.03 | OrthoFinder | |
AEA94365 | OG1RF_11678 | ABC superfamily ATP binding cassette transporter,... | 0.03 | OrthoFinder | |
AGT22922 | N559_1153 | iron transporter: fur regulated [Ensembl]. ABC 3... | 0.14 | OrthoFinder | |
AGT22923 | N559_1154 | iron transport system inner membrane permease component... | 0.14 | OrthoFinder | |
AGT22969 | N559_1203 | putative ABC transport system permease component... | 0.03 | OrthoFinder | |
AKI48124 | L2625_00151 | zinc ABC transporter, permease protein [Ensembl]. ABC... | 0.02 | OrthoFinder | |
AKI49843 | mntC, L2625_01990 | manganese ABC transporter, permease protein [Ensembl].... | 0.05 | OrthoFinder | |
CPC53217 | sitD, ERS093114_00721 | Manganese ABC transporter%2C inner membrane permease... | 0.05 | OrthoFinder | |
CRO76540 | znuB_1 | High-affinity zinc uptake system membrane protein ZnuB... | 0.03 | OrthoFinder | |
EDJ90086 | CGSHi22421_06568 | iron (chelated) ABC transporter permease protein... | 0.03 | OrthoFinder | |
EDJ90087 | CGSHi22421_06573 | iron (chelated) ABC transporter permease protein... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005887 | integral component of plasma membrane | IEA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEA | Interproscan |
CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
MF | GO:0004089 | carbonate dehydratase activity | IEP | Enrichment |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
MF | GO:0005506 | iron ion binding | IEP | Enrichment |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
BP | GO:0006811 | ion transport | IEP | Enrichment |
BP | GO:0006812 | cation transport | IEP | Enrichment |
BP | GO:0006826 | iron ion transport | IEP | Enrichment |
MF | GO:0008849 | enterochelin esterase activity | IEP | Enrichment |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0009306 | protein secretion | IEP | Enrichment |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
BP | GO:0030001 | metal ion transport | IEP | Enrichment |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
BP | GO:0032940 | secretion by cell | IEP | Enrichment |
BP | GO:0035592 | establishment of protein localization to extracellular region | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
BP | GO:0046903 | secretion | IEP | Enrichment |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
BP | GO:0071692 | protein localization to extracellular region | IEP | Enrichment |
BP | GO:0140352 | export from cell | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001626 | ABC_TroCD | 11 | 266 |
No external refs found! |